DENSS

DENsity from Solution Scattering

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DENSS updated to v1.7.3

July 2, 2024 by Tom Grant

DENSS has been updated to v1.7.3 with bug fixes and features, including improvements in speed and robustness. DENSS has also been updated to be compatible with and integrated into BioXTAS RAW.

Features and Bug fixes:

  • Improved robustness of automatic Dmax selection in denss.fit_data.py.
  • Improved speed and robustness of automatic alpha selection in denss.fit_data.py.
  • Added calculation and printing of chi2 of I(q) fit to denss.fit_data.py.
  • Added ability to select arbitrary ranges of points in denss.fit_data.py GUI.
  • Added ability to accept only two columns, q and I, in input data for denss.fit_data.py (error bars set to 1 in this case)
  • Moved logging in denss.pdb2mrc.py script to PDB2MRC() class.
  • Added methods to PDB2MRC() class to improve compatibility and integration for third party software packages such as RAW.
  • Fixed bugs in parsing PDB files.
denss.fit_data.py screenshot
Screenshot of denss.fit_data.py from DENSS v1.7.3 including showing the new Remove: input box allowing for arbitrary removal of data points and ranges.

Filed Under: Developments, News

Contact the Author:

  • Email
    tdgrant@buffalo.edu
  • Phone
    (716) 829-5490
  • Address
    Jacobs School of Medicine and Biomedical Sciences
    SUNY University at Buffalo
    955 Main Street
    Buffalo, New York, USA 14203

Contact the Author:

  • Email
    tdgrant@buffalo.edu
  • Phone
    (716) 829-5490
  • Address
    Jacobs School of Medicine and Biomedical Sciences
    SUNY University at Buffalo
    955 Main Street
    Buffalo, New York, USA 14203

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